Metos3D is a collection of simulation software, models and data intended to be used for simulation and optimization of marine ecosystem models. Metos3D is organized in separate git repositories. The current versions are:
|metos3d||main script, should be run as a shell command|
|simpack||main software, transport driver|
|model||marine biogeochemical/ecosystem models|
|data||geometry data, forcing data, transport matrices|
python -c "$(curl -fsSL https://github.com/metos3d/metos3d/raw/master/install.py)"
The code will be installed in a subdirectory called ".metos3d" of your home directory.
The main scientific document can be found at:
A technical report explaining the
matrix command can be found at:
Additionally, each repository consists of a documentation folder named
Metos3D needs the Portable, Extensible Toolkit for Scientific Computation (PETSc) to run. Here, version 3.7 is required.
Important changes that has been accomplished lately:
– Diagnostic versions of the N, N-DOP, ..., NPZD-DOP models have been added.
– The BGC API includes now diagnostic variables. See: metos3d-model.pdf
matrix command has been added.
– Metos3D works with PETSc 3.7 now.
Have trouble installing Metos3D? Contact Jaroslaw Piwonski, attach the output of the script and kindly ask for help.